And I'm back.

Other mods:

• Instantly Destroy Boats And Carts: unbuild boats and carts like any other building piece. Optionally prevent while occupied and/or with cargo in the hold.
  
• ComfortTweaks: adjust time to rested, base rested time, rested time per comfort level, the effect of rested on stam/hp regen, radius for comfort effect from pieces, whether shelter is needed to gain resting; and you can also enable a hotkey to quickly see which comfort pieces you have and which you could but don't.
  
• ContentsWithin: shows the contents of folders on hover using the default UI. Theres another mod that shows contents as a text list, I forget the name but it's by Azumatt.
  
• AzuAreaRepair: repair pieces in a radius around the player. Especially useful if your build has hidden clipped through pieces. Quite cheaty, since it's fast, though it does still take however much stam would have been required for each individually (which also means you don't get all pieces it maxs out stam).
  
• There's a few backpack mods, I believe Jouton(sp?) Backpacks was the one I used quite some time ago.
  
• I'm keen to try AutoMapPins sometime, but my current run is aimed at vanillaish with added difficulty, so anything that affects time to discover is cheating.
  
• Better Archery: not my cup of tea but I can see why people might like it. Been awhile, I've no idea if it's updated for current versions.
  
• There's mods to tweak portal item allowances, not sure which one I used last and it was some updates ago. I used it to allow refined metal, but not ore - had to set up mining camps but faster access to main base & crafting tables. The other option I considered was no metal items at all, but I'm not masochist enough for that.
  
• There's the likes of Epic Loot or Jewelcrafting, which add ability to upgrade weapons/armour with significant additional effects. I've only tried the former.
  
• There's trader mods, the two big things that come to mind are buy/sell more items, and bounty quests (kill specially spawned creature somewhere on map, find special treasure chest spawned on map) for rewards.
  
• There's UI mods like Auga or BetterUI.
  
• If you're into multiplayer there's mods that add anti-cheat, kicking players with blacklisted/not whitelisted mods, forcing player character saves on server so they can't be tampered, etc. Some mods can force server settings on clients, some can't or can't for all settings so that's something to be wary of.
  
• There's mods aimed at creative mode, there's one called Better Creative that I haven't tried. There's also PlanBuild which can be useful in a normal game too - however it has significant terrain editing ability and I can't remember if that can be disabled - with it in a normal game is cheating.

I'm sure there's tonnes I'm forgetting, mods I've never seen or heard of, and there's mods that are sadly no longer compatible and seem to have no up to date equivalent - like SkipIntro, which skips the new char speel and bird flight.